CRAN Package Check Results for Maintainer ‘Longfei Wang <wang.lo at wehi.edu.au>’

Last updated on 2022-08-15 08:50:36 CEST.

Package	FAIL	OK
UKB.COVID19	2	11

Package UKB.COVID19

Current CRAN status: FAIL: 2, OK: 11

Version: 0.1.3
Check: tests
Result: FAIL
    Check process probably crashed or hung up for 20 minutes ... killed
    Most likely this happened in the example checks (?),
    if not, ignore the following last lines of example output:
    > ### Aliases: variantQC
    >
    > ### ** Examples
    >
    > ## Not run:
    > ##D variantQC(snpQcFile=covid_example("sim_ukb_snp_qc.txt.gz"),
    > ##D mfiDir=covid_example("alleleFreqs"),
    > ##D mafFilt=0.001,
    > ##D infoFilt=0.5,
    > ##D outDir=covid_example("results"))
    > ## End(Not run)
    >
    >
    >
    >
    > ### * <FOOTER>
    > ###
    > cleanEx()
    > options(digits = 7L)
    > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
    Time elapsed: 5.89 0.91 7.93 NA NA
    > grDevices::dev.off()
    null device
     1
    > ###
    > ### Local variables: ***
    > ### mode: outline-minor ***
    > ### outline-regexp: "\\(> \\)?### [*]+" ***
    > ### End: ***
    > quit('no')
    ======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-x86_64

Version: 0.1.3
Check: tests
Result: FAIL
    Check process probably crashed or hung up for 20 minutes ... killed
    Most likely this happened in the example checks (?),
    if not, ignore the following last lines of example output:
    > ### Aliases: variantQC
    >
    > ### ** Examples
    >
    > ## Not run:
    > ##D variantQC(snpQcFile=covid_example("sim_ukb_snp_qc.txt.gz"),
    > ##D mfiDir=covid_example("alleleFreqs"),
    > ##D mafFilt=0.001,
    > ##D infoFilt=0.5,
    > ##D outDir=covid_example("results"))
    > ## End(Not run)
    >
    >
    >
    >
    > ### * <FOOTER>
    > ###
    > cleanEx()
    > options(digits = 7L)
    > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
    Time elapsed: 6.01 0.54 6.57 NA NA
    > grDevices::dev.off()
    null device
     1
    > ###
    > ### Local variables: ***
    > ### mode: outline-minor ***
    > ### outline-regexp: "\\(> \\)?### [*]+" ***
    > ### End: ***
    > quit('no')
    ======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-release-windows-x86_64