SMITIDvisu: Visualize Data for Host and Viral Population from 'SMITIDstruct'
using 'HTMLwidgets'
Visualisation tools for 'SMITIDstruct' package.
Allow to visualize host timeline, transmission tree, index diversities
and variant graph using 'HTMLwidgets'. It mainly using 'D3JS' javascript framework.
| Version: |
0.0.9 |
| Depends: |
R (≥ 3.5.0), utils |
| Imports: |
Rcpp (≥ 0.11.0), htmlwidgets (≥ 0.3.2), yaml (≥ 2.1.16), jsonlite (≥ 1.5.0), magrittr |
| LinkingTo: |
Rcpp |
| Suggests: |
SMITIDstruct, knitr, shiny, testthat (≥ 3.0.0) |
| Published: |
2021-02-08 |
| Author: |
Jean-Francois Rey [aut, cre],
Julien Boge [ctb] |
| Maintainer: |
Jean-Francois Rey <jean-francois.rey at inrae.fr> |
| License: |
GPL (≥ 3) | file LICENSE |
| URL: |
https://informatique-mia.inrae.fr/biosp/anr-smitid-project/,
https://gitlab.paca.inrae.fr/SMITID/visu/ |
| NeedsCompilation: |
yes |
| SystemRequirements: |
C++11 |
| CRAN checks: |
SMITIDvisu results |
Documentation:
Downloads:
Linking:
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