TREXr: Tree Sap Flow Extractor
Performs data assimilation, processing and analyses on sap flow data obtained with the thermal dissipation method (TDM). The package includes functions for gap filling time-series data, detecting outliers, calculating data-processing uncertainties and generating uniform data output and visualisation. The package is designed to deal with large quantities of data and to apply commonly used data-processing methods. The functions have been validated on data collected from different tree species across the northern hemisphere (Peters et al. 2018 <doi:10.1111/nph.15241>).
| Version: | 1.0.0 |
| Depends: | R (≥ 3.5.0) |
| Imports: | chron, zoo, solaR, stats, graphics, lubridate, utils, grDevices, lhs, doParallel, foreach, tibble, dplyr, sensitivity, randtoolbox, boot, doSNOW, msm, parallel, magrittr, tools |
| Suggests: | shiny, plotly |
| Published: | 2021-03-24 |
| Author: | Richard Peters 
[cre, aut, cph],
Christoforos Pappas
[aut, ctb],
Alexander Hurley
[aut, cph],
Rafael Poyatos [ctb],
Victor Flo [ctb],
Roman Zweifel [ctb],
Willem Goossens [ctb],
Kathy Steppe [ths, etr, fnd] |
| Maintainer: | Richard Peters <richardlouispeters3 at hotmail.com> |
| BugReports: | https://github.com/the-Hull/TREX/issues |
| License: | MIT + file LICENSE |
| URL: | https://the-hull.github.io/TREX/ |
| NeedsCompilation: | no |
| Citation: | TREXr citation info |
| Materials: | README |
| CRAN checks: | TREXr results |
Documentation:
| Reference manual: | TREXr.pdf |
Downloads:
| Package source: | TREXr_1.0.0.tar.gz |
| Windows binaries: | r-devel: TREXr_1.0.0.zip, r-release: TREXr_1.0.0.zip, r-oldrel: TREXr_1.0.0.zip |
| macOS binaries: | r-release (arm64): TREXr_1.0.0.tgz, r-oldrel (arm64): TREXr_1.0.0.tgz, r-release (x86_64): TREXr_1.0.0.tgz, r-oldrel (x86_64): TREXr_1.0.0.tgz |
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