This is a set of tools for dendrograms and tree plots using 'ggplot2'. The 'ggplot2' philosophy is to clearly separate data from the presentation. Unfortunately the plot method for dendrograms plots directly to a plot device without exposing the data. The 'ggdendro' package resolves this by making available functions that extract the dendrogram plot data. The package provides implementations for 'tree', 'rpart', as well as diana and agnes (from 'cluster') diagrams.
| Version: | 0.1.23 |
| Imports: | MASS, ggplot2 (≥ 0.9.2) |
| Suggests: | rpart (≥ 4.0-0), tree, testthat, knitr, cluster, scales, spelling, rmarkdown, covr |
| Published: | 2022-02-16 |
| Author: | Andrie de Vries [aut, cre], Brian D. Ripley [aut] (author of package tree) |
| Maintainer: | Andrie de Vries <apdevries at gmail.com> |
| BugReports: | https://github.com/andrie/ggdendro/issues |
| License: | GPL-2 | GPL-3 |
| URL: | https://github.com/andrie/ggdendro |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | NEWS |
| CRAN checks: | ggdendro results |
| Reference manual: | ggdendro.pdf |
| Vignettes: |
Introduction to ggdendro |
| Package source: | ggdendro_0.1.23.tar.gz |
| Windows binaries: | r-devel: ggdendro_0.1.23.zip, r-release: ggdendro_0.1.23.zip, r-oldrel: ggdendro_0.1.23.zip |
| macOS binaries: | r-release (arm64): ggdendro_0.1.23.tgz, r-oldrel (arm64): ggdendro_0.1.23.tgz, r-release (x86_64): ggdendro_0.1.23.tgz, r-oldrel (x86_64): ggdendro_0.1.23.tgz |
| Old sources: | ggdendro archive |
| Reverse depends: | EnsCat, GOplot, sangeranalyseR |
| Reverse imports: | abseqR, AneuFinder, artMS, barcodetrackR, benchdamic, BloodCancerMultiOmics2017, CEMiTool, chemodiv, DEGreport, diffudist, discoveR, EGAnet, evaluomeR, FlexDotPlot, forestmangr, hierarchicalSets, iCellR, iheatmapr, Linnorm, MIGSA, missCompare, mosaic, MutationalPatterns, netZooR, ngsReports, PhosR, Plasmidprofiler, plotBart, PTXQC, qPLEXanalyzer, rabhit, rwty, SensMap, SPARTAAS, spatialHeatmap, statVisual, superheat, TimiRGeN, triplot, visvow, Xplortext |
| Reverse suggests: | AntMAN, CellaRepertorium, disclapmix, EWCE, fairmodels, ggh4x, ggside, microeco, migraph, propr, rattle, ShinyItemAnalysis, SomaticSignatures, stabm, structToolbox |
| Reverse enhances: | dendextend |
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